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Table 2 QCMF-significant essential sites in the human GCK protein, which are nearby either nsSNPs or strictly conserved sites

From: Quantum coupled mutation finder: predicting functionally or structurally important sites in proteins using quantum Jensen-Shannon divergence and CUDA programming

QCMF-significant

Nearby nsSNPs or strictly

Reference

essential sites

conserved sites

 

M37

36s,39s,40s

[38, 39, 43, 51]

S76

147c

 

L79

78c,80c,150c

-

T82

81c

-

N83

81c,108s,110s

[43, 51]

V86

85c,106s

[38]

S127

130s

[40]

F148

147c,150c,s

[38, 39, 43, 51]

F152

150c,s, 151c

[39, 43, 51]

P153

154s

[39]

H156

154s

[39]

A176

119s,175s

[43]

G178

164c

 

N180

162s,182s

[38, 39, 43],

L185

182s,188s

[39, 43, 51]

A201

147c,453c

 

M202

147c,203s

[43]

A232

223s,231c

[39, 40, 51]

C233

223s,234c,235c

[39, 40, 51]

V253

234c,254c

 

F260

257s,258c,259s,261s

[39, 43]

L271

274c

 

V277

274c,278c,279s

[43]

S281

278c,279s

[43]

Y297

291c,295c,299c, 300s

[43]

M298

295c,299c,300s

[43]

T332

295c,299c

 

V374

377c

 

A378

377c,382s

[43]

A379

377c,382s

[43]

S383

382s,385s

[43]

A384

382s,385s

[43]

A387

385s

[43]

S388

385s,392s

[38, 43]

V412

226s,227c,410c,414s,416s

[40, 43]

F419

416s

[40]

E443

444c,445c,447s

[39]

G446

444c,445c,447s,448c,449c

[39]

  1. s: non-synonymous snp site, c: strictly conserved site.