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Figure 2 | BMC Bioinformatics

Figure 2

From: Topic modeling for cluster analysis of large biological and medical datasets

Figure 2

Hierarchical cluster analysis of the LDA-derived clusters. The dendrogram shows a simplified tree-structure of 30 topic clusters (T0 to T29). For each of the 30 clusters, the average of PFGE band presence /absence of all sample isolates at 60 designated band locations were calculated. The hierarchical clustering algorithm was applied on the Euclidean distance measures of the means of the 30 clusters and two major clusters (A and B) were grouped.

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