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Table 2 StavroX results for DSS cross-linking of Rim1 dimer

From: XLPM: efficient algorithm for the analysis of protein-protein contacts using chemical cross-linking mass spectrometry

Score m/z Charge Precursor mass Calculated mass PPM Sequence 1 Sequence 2 Cross-linked residues
587 574.8339 4 2296.3136 2296.3122 0.6 [DINLLKDGK] [DIDLLKNGKK] 101-101
243 533.9705 3 1599.8968 1599.8952 1.01 [NGKK] [DIDLLKDGK] 104-101
236 866.7906 3 2598.3574 2598.3562 0.45 [NGKK] [KGALVYVEADAANYVFER] 104-64
224 599.3107 3 1795.9176 1795.9146 1.68 {mDFSK] [DIDLLKNGK] 1-101
201 633.309 6 3794.8185 3794.8117 1.78 [DINLLKNGK] [KLEDAEGEENAASSELEHHHHHH} 101-105
187 971.1871 3 2911.5468 2911.5411 1.96 [YLKYSIASQPR] [DDGSKGTTLSLVQK] 29-86
130 1012.1968 3 3034.576 3034.579 -1.01 [DDGSKGTTLSLVQK] [DDGSKGTTLSLVQK] 86-86
114 856.3831 4 3422.5106 3422.5091 0.46 {mDFSK] [KLEDAEGQENAASSELEHHHHHH} 1-105
113 792.6713 4 3167.664 3167.6623 0.52 [DINLLKNGK] [KGALVYVEADAADYVFER] 101-64
113 636.6771 3 1908.0166 1908.0147 1.03 {MDFSK] [DINLLKDGKK] 1-104
110 799.8846 6 4794.2715 4794.2567 3.07 [KGALVYVEADAANYVFER] [KLEDAEGQENAASSELEHHHHHH} 64-105
108 650.5901 4 2599.3385 2599.3402 -0.66 [DGKK] [KGALVYVEADAANYVFER] 105-64
102 821.4157 5 4103.0494 4103.0455 0.96 [DDGSKGTTLSLVQK] [KGALVYVEADAANYVFERDDGSK] 86-64
  1. The table shows only the highest scoring results for a cross-linked pair