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Table 4 XLPM results for DSS cross-linking of Rim1 dimer

From: XLPM: efficient algorithm for the analysis of protein-protein contacts using chemical cross-linking mass spectrometry

m/z

Sequence 1

Sequence 2

Calculated mass

Precursor mass

Charge

XLPM score

Cross-linked residues

799.8850098

kLEDAEGQENAASSELEHHHHHH

kGALVYVEADAANYVFER

4793.26531

4793.263184

6

1.301676894

105-64

728.6427002

DDGSkGTTLSLVQk

YLkYSIASQPR

2910.54962

2910.539551

4

1.105475415

86-29

900.9683838

kGALVYVEADAANYVFER

DDGSkGTTLSLVQk

3599.85173

3599.842285

4

1.094423763

64-86

  1. The table shows only the highest scoring results for a cross-linked pair