From: Discovering co-occurring patterns and their biological significance in protein families
APC | Residue(s) | Role(s) | Literature |
---|---|---|---|
4 | Cys(C)14 | Cys(C) 14 enhances axial ligand strength between His18 and the heme. | |
 | Cys(C)17 | Cys(C) 17 enhances axial ligand strength between His18 and the heme. | |
 | His(H)18 | His(H)18 forms an axial ligand with the heme from the proximal front. | |
5 | Tyr(Y)67 | Tyr(Y)67, its hydroxyl group, forms a H-bond with side chains of Met80 for structural stabilization. | |
 | Pro(P)71 | Pro(P)71 helps coordinate the axial ligand between Met80 and the heme. | [37] |
 | Pro(P)76 | Pro(P)76 helps coordinate the axial ligand between Met80 and the heme. | [38] |
 | Met(M)80 | Met(M)80 forms an axial ligand with the heme from the distal side. | |
 | Phe(F)82 | Phe(F)82 helps stabilize the native heme environment. | [39] |
6 | Gly(G)41 | Gly(G)41 helps stabilize the axial ligand between Met80 and the heme. | [40] |
7 | Asn(N)52 | Asn(N)52 maintains a hydrogen bond with the heme to stabilize the environment. | |
8 | Leu(L)94 | One of Leu(L)94 or Tyr(Y)97 is required to provide a hydrophobic environment for the function of cyt-c. | [43] |
 | Tyr(Y)97 | One of Leu(L)94 or Tyr(Y)97 is required to provide a hydrophobic environment for the function of cyt-c. | [43] |