From: Improved packing of protein side chains with parallel ant colonies
Thread ID | Score function | Score terms | α | β | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A | B | C | D | E | F | G | H | I | G | K | L | M | N | O | P | Q | ||||
1 | standard | 0.8 | 0.44 | 0.65 | 0.004 | 0.49 | 0.56 | 1.17 | 1.17 | 1.17 | 1.1 | 0.5 | 2 | 5 | 5 | 1 | 0 | 0 | 3 | 1 |
2 | score12 | 0.8 | 0.44 | 0.65 | 0.004 | 0.49 | 0.56 | 1.17 | 0.585 | 1.17 | 1.1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 1 |
3 | score12 full | 0.8 | 0.44 | 0.65 | 0.004 | 0.49 | 0.56 | 1.17 | 0.585 | 1.17 | 1.1 | 0.5 | 2 | 5 | 5 | 1 | 0 | 0 | 1 | 2 |
4 | score12minpack | 0.8 | 0.44 | 0.65 | 0.004 | 0.49 | 0.56 | 1.17 | 0.585 | 1.17 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 3 |
5 | score13 | 0.6921 | 0.1754 | 0.5253 | -0.00764 | 0.53 | 0.63 | 1.322 | 0.336 | 2 | 1.883 | 0.5 | 2 | 5 | 5 | 1 | 0.571 | 0 | 2 | 1 |
7 | score13 | 0.6921 | 0.1754 | 0.5253 | -0.00764 | 0.53 | 0.63 | 1.322 | 0.336 | 2 | 1.883 | 0.5 | 2 | 5 | 5 | 1 | 0.571 | 0 | 1 | 1 |
8 | pack no hb env dep | 0.8 | 0.1 | 0.65 | 0.004 | 0.49 | 0.56 | 1.17 | 1.17 | 1.17 | 3.1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 3 | 1 |
6 | RosettaHoles score | The RosettaHoles scores are based on packing information about a cavity ball and the local region surrounding it, most importantly the contact surface area of atoms surrounding the cavity with respect to a sequence of probe radii. | 1 | 2 |