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Table 1 Score function and ACO parameters.

From: Improved packing of protein side chains with parallel ant colonies

Thread ID Score function Score terms α β
   A B C D E F G H I G K L M N O P Q   
1 standard 0.8 0.44 0.65 0.004 0.49 0.56 1.17 1.17 1.17 1.1 0.5 2 5 5 1 0 0 3 1
2 score12 0.8 0.44 0.65 0.004 0.49 0.56 1.17 0.585 1.17 1.1 1 1 1 1 1 0 0 1 1
3 score12 full 0.8 0.44 0.65 0.004 0.49 0.56 1.17 0.585 1.17 1.1 0.5 2 5 5 1 0 0 1 2
4 score12minpack 0.8 0.44 0.65 0.004 0.49 0.56 1.17 0.585 1.17 1 1 1 1 1 1 0 0 1 3
5 score13 0.6921 0.1754 0.5253 -0.00764 0.53 0.63 1.322 0.336 2 1.883 0.5 2 5 5 1 0.571 0 2 1
7 score13 0.6921 0.1754 0.5253 -0.00764 0.53 0.63 1.322 0.336 2 1.883 0.5 2 5 5 1 0.571 0 1 1
8 pack no hb env dep 0.8 0.1 0.65 0.004 0.49 0.56 1.17 1.17 1.17 3.1 1 1 1 1 1 0 1 3 1
6 RosettaHoles score The RosettaHoles scores are based on packing information about a cavity ball and the local region surrounding it, most importantly the contact surface area of atoms surrounding the cavity with respect to a sequence of probe radii. 1 2