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Table 1 Various performance indicators of different algorithm on Krogan and Collins datasets

From: An efficient protein complex mining algorithm based on Multistage Kernel Extension

Dataset

Method

clusters

matched

Sn

PPV

Acc

Krogan

CFinder

121

34

0.611

0.162

0.315

 

MCL

483

68

0.411

0.408

0.409

 

MKE

156

82

0.384

0.522

0.448

Collins

CFinder

114

66

0.661

0.367

0.492

 

MCL

183

88

0.587

0.409

0.536

 

MKE

115

88

0.496

0.664

0.574

  1. The figures of CFinder and MCL derive from literature [17]
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BMC Bioinformatics

ISSN: 1471-2105

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