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Table 2 The five protein complexes with minimal p-value by MKE mining algorithm

From: An efficient protein complex mining algorithm based on Multistage Kernel Extension

Dataset

ID

P-value

Identification

Gene Ontology term

Krogan

1

4.78e-47

26 out of 26 genes, 100.0%

RNA splicing, via transesterification reactions with bulged adenosine as nucleophile

 

2

9.26e-41

15 out of 15 genes, 100.0%

chromatin disassembly

 

3

2.47e-30

19 out of 21 genes, 90.5%

mitochondrial translation

 

4

7.92e-26

19 out of 23 genes, 82.6%

modification-dependent protein catabolic process

 

5

3.80e-19

17 out of 17 genes, 100.0%

transcription from RNA polymerase II promoter

Collins

1

1.98e-91

67 out of 93 genes, 72.0%

cytoplasmic translation

 

2

1.07e-28

25 out of 25 genes, 100.0%

transcription from RNA polymerase II promoter

 

3

1.42e-41

24 out of 24 genes, 100.0%

mitochondrial translation

 

4

6.79e-28

14 out of 15 genes, 93.3%

mRNA 3'-end processing

 

5

5.17e-44

16 out of 16 genes, 100.0%

chromatin disassembly