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Figure 5 | BMC Bioinformatics

Figure 5

From: LigandRFs: random forest ensemble to identify ligand-binding residues from sequence information alone

Figure 5

LIGPLOT 38 of binding site residues to ligands for PDB ID, 3NO3. (a) the binding site residues to metal ion Mg301 (colored in cyan); (b) the structure of protein 3NO3 (GOL303 is colored in ruby and Mg301 in cyan); (c) The binding sites to non-metal ion GOL303 (colored in ruby). In CASP9 experiment, only His30, Glu59, Asp61, Glu123, Ile156, Phe158, Leu178 and Trp222 are deemed as ligand binding site residues.

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BMC Bioinformatics

ISSN: 1471-2105

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