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Table 1 Recent studies for constructing protein graphs.

From: Adjusting protein graphs based on graph entropy

Ref. Vertex Set Edge Set
[20] C α atoms labeled edges
[21] DSSP attributed edges
[22] side chains defined by interacted energy
[23] residues defined by geometrical constraints
[24] SSE labeled edges
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BMC Bioinformatics

ISSN: 1471-2105

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