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Table 1 Results of MT applied to three short-read alignment programs (BWA, Bowtie and Bowtie2) ran on the paired-end sequencing simulated reads of varying number.

From: Verification and validation of bioinformatics software without a gold standard: a case study of BWA and Bowtie

MRs 103 104 105 106 107
BWA
MR1 F F F F F
MR2 F F F F F
MR3 F F F F F
MR4   F F F F
MR5 F F F F F
MR6      
MR7     F F
MR8      
MR9      
Bowtie
MR1  
MR2 F F F F F
MR3      
MR4      
MR5 F F F F F
MR6      
MR7      
MR8 F F F F F
MR9      
Bowtie2
MR1  
MR2 F F F F F
MR3      
MR4      
MR5 F F F F F
MR6      
MR7      
MR8 F F F F F
MR9      
  1. F (Failure).