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Table 6 The three physicochemical properties selected by SCM-PCPs.

From: SCMHBP: prediction and analysis of heme binding proteins using propensity scores of dipeptides

Amino acid Heme protein Score (Rank) 1SNEP660103 Score (Rank) 2TAKK010101 Score (Rank) 3KARP850101 Score (Rank)
F-Phe 705.3(1) 0.438(2) 23.0(2) 0.93(19)
H-His 615.6(2) 0.320(4) 11.9(9) 0.982(14)
G-Gly 604.3(3) -0.073(12) 0.0(20) 1.142(3)
W-Trp 603.1(4) 0.493(1) 24.2(1) 0.925(20)
P-Pro 601.3(5) -0.016(9) 15.0(7) 1.055(8)
M-Met 599.6(6) -0.041(10) 11.9(8) 0.947(18)
D-Asp 574.3(7) -0.285(20) 4.9(14) 1.033(11)
L-Leu 570.1(8) -0.008(8) 17.0(5) 0.967(15)
K-Lys 568.3(9) 0.049(6) 10.5(10) 1.093(6)
R-Arg 566.1(10) 0.079(5) 7.3(12) 1.038(10)
A-Ala 558.8(11) -0.110(13) 9.8(11) 1.041(9)
Y-Tyr 541.0(12) 0.381(3) 17.2(4) 0.961(16)
V-Val 535.5(13) -0.155(16) 15.3(6) 0.982(13)
I-Ile 518.3(14) 0.001(7) 17.2(3) 1.002(12)
Q-Gln 511.2(15) -0.067(11) 2.4(19) 1.165(2)
T-Thr 498.6(16) -0.208(18) 6.9(13) 1.073(7)
C-Cys 494.9(17) -0.184(17) 3.0(17) 0.96(17)
E-Glu 494.6(18) -0.246(19) 4.4(15) 1.094(5)
N-Asn 468.7(19) -0.136(14) 3.6(16) 1.117(4)
S-Ser 401.4(20) -0.153(15) 2.6(18) 1.169(1)
R 1.00 0.60 0.58 -0.56
  1. 1SNEP660103 = Principal component III.
  2. 2TAKK010101 = Side-chain contribution to protein stability (kJ/mol).
  3. 3KARP850101 = Flexibility parameter for no rigid neighbors.
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