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Table 4 SARAH1 hydrophobicity scale.

From: Protein inter-domain linker prediction using Random Forest and amino acid physiochemical properties

Amino acid Hydrophobicity index Amino acid Hydrophobicity index
C 1,1,0,0,0 G 0,0,0,-1,-1
F 1,0,1,0,0 T 0,0,-1,0,-1
I 1,0,0,1,0 S 0,0,-1,-1,0
V 1,0,0,0,1 R 0,-1,0,0,-1
L 0,1,1,0,0 P 0,-1,0,-1,0
W 0,1,0,1,0 N 0,-1,-1,0,0
M 0,1,0,0,1 D -1,0,0,0,-1
H 0,0,1,1,0 Q -1,0,0,-1,0
Y 0,0,1,0,1 E -1,0,-1,0,0
A 0,0,0,1,1 K -1,-1,0,0,0
  1. Each AA is assigned a five-bit code in descending order of the binary value of the corresponding code where the right-half is the negative mirror image of the left-half. The 10 most hydrophobic residues are positive, and the 10 least hydrophobic residues are negative.