Table 5 Amino acid classification according to their physiochemical properties.
From: Protein inter-domain linker prediction using Random Forest and amino acid physiochemical properties
Peoperty | Value | Amino acids |
|---|---|---|
Charge | Positive | H, K, R |
| Â | Negative | D, E |
| Â | Neutral | A, C, F, G, I, L, M, N, P, Q, S, T, V, W, Y |
Polatity | Polar | C, D, E, H, K, N, Q, R, S, T, Y |
| Â | Non-polar | A, F, G, I, L, M, P, V, W |
Aromaticity | Aliphatic | I, L, V |
| Â | Aromatic | F, H, W, Y |
| Â | Neutral | A, C, D, E, G, K, M, N, P, Q, R, S, T |
Size | Small | A, G, P, S |
| Â | Medium | D, N, T |
| Â | Large | C, E, F, H, I, K, L, M, Q, R, V, W, Y, |
Electronic | Strong donor | A, D, E, P |
| Â | Weak donor | I, L, V |
| Â | Neutral | C, G, H, S, W |
| Â | Weak acceptor | F, M, Q, T, Y |
| Â | Strong acceptor | K, N, R |