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Table 6 Relative performance of MPSS and PW distances for SCOP Folds.

From: Automatic classification of protein structures using low-dimensional structure space mappings

 

CE

CE(Z)

Dali

Dali(Z)

FATCAT

FATCAT(Z)

MATT

MATT(Z)

Z : Raw

1.588

1.002

1.137

1.063

CMDS : PW

1.525

0.993

0.964

0.918

1.167

0.993

1.114

1.053

SMACOF : PW

1.418

1.027

1.152

1.137

1.088

0.937

1.106

1.043

SMACOF : CMDS

0.929

1.034

1.195

1.240

0.932

0.943

0.993

0.991

  1. Fold classification performance. The convention used for presenting the data is the same as in Table 5.