On the selection of appropriate distances for gene expression data clustering

BMC Bioinformatics

Table 2 Summary of the time-series benchmark data employed in our evaluation.

Name	Source	noo	nfo	nf
1M sorbitol		1030	6152	7
diauxic shift		1016	6152	7
complete DTT		962	6152	7
heat shock 2		999	6152	7
1.5mM diamide		1038	6152	8
2.5mM DTT	Gasch et al. (2000)	991	6152	8
heat shock 1		988	6152	8
1mM menadione		1050	6152	9
constant 32nM H2O2		976	6152	10
nitrogen depletion		1011	6152	10
YPD 2		1022	6152	10
YPD 1		1011	6152	12
elutriation		935	6178	14
cdc 28		1044	6178	17
alpha factor	Spellman et al. (1998)	1099	6178	18
cdc 15		1086	6178	24
sporulation	Chu et al. (1998)	1171	6118	7

Columns display name of the data, source, number of objects originally in the dataset (noo), number of filtered objects (nfo) and, number of features (nf ), respectively.

ISSN: 1471-2105