Skip to main content

Table 1 Main features of the analysed complexes

From: MDcons: Intermolecular contact maps as a tool to analyze the interface of protein complexes from molecular dynamics trajectories

PDB ID Receptor Ligand Δ G (kcal/mol) C50 C70 C90 # ICs CRkl = 1 MD Interface area (Å2)
7CEI Colicin
E7 nuclease
Im7 immunity protein -19.50 1.0 0.84 0.69 19 733 ± 38
1QA9 CD2 CD58 -7.16 0.95 0.78 0.49 9 641 ± 41
  1. PDB IDs, binding free energies in kcal/mol and MDcons results for the Im7- ColE7 and CD2-CD58 complexes