| 1x | 2x | 10x |
---|
 | Total | Accuracy | Total | Accuracy | Total | Accuracy |
---|
skipped | 56 | 98.21 | 183 | 96.17 | 3427 | 80.84 |
wrong | 346 | 89.30 | 463 | 84.88 | 351 | 62.68 |
- At 10x, 80% of the 3,427 reads Bowtie did not map had a unique mapping in the genome. Even with a normal error profile, 55 out of 56 reads skipped by Bowtie could have been uniquely mapped. At normal error rates, 346 sequences were incorrectly mapped to a worse location than where they originated.