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Table 3 Speedup of Ours1 relative to other versions

From: Multicore and GPU algorithms for Nussinov RNA folding

n

CPU 2

OMP 2

n

CPU 2

OMP 2

3000

157.0

33.8

10000

424.4

91.7

4000

224.7

48.1

11000

441.4

95.1

5000

259.8

56.1

12000

465.9

100.0

6000

302.9

77.3

13000

472.3

102.2

7000

341.8

74.1

14000

496.9

107.5

8000

376.0

82.9

15000

503.3

108.4

9000

392.2

85.4

16000

522.6

113.4