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Table 2 Summary of the prediction results by ProbeAlign on the FragSeq data.

From: ProbeAlign: incorporating high-throughput sequencing-based structure probing information into ncRNA homology search

 

RF00003

RF00004

RF00012

RF00015

RF00020

RF00026

RF00096

RF00548

RF00007

 

U1

U2

U3

U4

U5

U6

U8

U11

U12

d5np

46(46)

18(18)

11(11)

243(17)

12(12)

120(117)

2(2)

1

4

undiff

46(46)

19(19)

11(11)

302(21)

12(12)

146(134)

2(2)

1

4

  1. The numbers in the brackets show that how many predictions by ProbeAlign are recorded in Repbase.