Figure 9
From: SWAP-Assembler: scalable and efficient genome assembly towards thousands of cores
Time usage comparison on a share memory machine for three small datasets (Time unit: seconds in logarithmic scale). In this test, the length of k-mer for all assemblers is set to be 31 and the k-mers cutoff threshold is set to be 3. For the three datasets, the sequencing data filtered by ALLPATH-LG is their input data. The time usage is recorded until the contig is generated. The horizontal axis is marked with the name of assemblers and the number of cores used.