Table 2 Description of message functions, internal functions, and user-defined functions used in Algorithm 1 and 2.
From: SWAP-Assembler: scalable and efficient genome assembly towards thousands of cores
Class | Function name | Function description |
|---|---|---|
Message functions | Msg Lock(a, p) | Lock a in process p |
| Â | Msg Unlock(a, p) | Unlock a in process p |
| Â | Msg Read(a, p) | Fetch associated values of a |
| Â | Msg Write(a, newa, p) | Update associated values of a with newa |
| Â | Msg Locksuccess(a, R(a, b), p) | Send Locksuccess Message back to R(a, b) |
| Â | Msg Lockfailed(a, R(a, b), p) | Send Lockfailed Message back to R(a, b) |
| Â | Msg ReadBack(a, R(a, b), p) | Send associated value of a back to R(a, b) |
| Â | Msg End() | Command to stop the service thread |
Internal functions | proc(a) | Get process ID of a |
| Â | trylock(a) | Lock a |
| Â | unlock(a) | Unlock a |
User-defined functions | GetSmallWorld( R(a, b) ) | Get small world [a, b] from operation R(a, b) |
| Â | Operation(a,b) | Compute the operation R(a, b) |