From: Near-optimal assembly for shotgun sequencing with noisy reads
p | Coverage (NL/G) | ϵ 1 |
---|---|---|
0.01 | 20 | 0.00 |
0.01 | 40 | 0.00 |
0.01 | 60 | 0.00 |
0.1 | 20 | 0.16 |
0.1 | 40 | 0.00 |
0.1 | 60 | 0.00 |
(a) Calibration for ϵ1. | ||
p | Number of bridging reads k | Upper bound for ϵ 2 |
0.01 | 1 | 0.060 |
0.01 | 3 | 0.0036 |
0.01 | 5 | 0.00024 |
0.1 | 11 | 0.089 |
0.1 | 21 | 0.022 |
0.1 | 31 | 0.0059 |
(b) Calibration for ϵ2 |