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Table 4 Counts of repeats vs. errors with increasing coverage. The proportion of reads due to errorsremains roughly constant, while the proportion due to repeats increases as coverage increases.

From: Fast lossless compression via cascading Bloom filters

Coverage

|R|(M)

repeats (M)

|FN|(M)

10

6.3

0.3

2.0

20

12.6

1.3

4.4

30

18.9

2.8

7.1

40

25.2

4.9

10.2

50

31.5

7.4

13.5

  1. errors with increasing coverage. The proportion of reads due to errors remains roughly constant, while the proportion due to repeats increases as coverage increases.
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BMC Bioinformatics

ISSN: 1471-2105

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