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Table 5 Independent testing performance for single HMM and MDD-clustered HMMs.

From: Characterization and identification of ubiquitin conjugation sites with E3 ligase recognition specificities

Models SEN SPE ACC MCC
Single HMM (all data) 63.54% 60.12% 61.30% 0.225
MDD-Model 1 70.16% 66.61% 67.83% 0.351
MDD-Model 2 87.70% 70.47% 76.41% 0.553
MDD-Model 3 74.78% 67.70% 70.14% 0.405
MDD-Model 4 63.27% 57.35% 59.39% 0.196
MDD-Model 5 52.74% 62.13% 58.90% 0.143
MDD-Model 6 77.50% 70.12% 72.66% 0.454
MDD-Model 7 71.66% 60.22% 64.16% 0.303
MDD-Model 8 65.17% 60.57% 62.16% 0.245
MDD-Model 9 68.07% 59.14% 62.22% 0.259
MDD-Model 10 70.65% 67.14% 68.35% 0.360
MDD-clustered HMMs 87.76% 70.02% 76.13% 0.549