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Table 1 Copy unit alleles and their bases at variable sites used in simulation analysis 1.

From: Estimating copy numbers of alleles from population-scale high-throughput sequencing data

No. Bases at variable sites
1 ATTGCGATATTGCGAT
1 ACGGATTTACGGATTT
3 CTTCGGAACTTCGGAA
4 CGATTGAACGTCGTAC
  1. For simplicity, we assume that all the bases at variable sites have bases taken from one of four characters: A, T, C, and G.