Skip to main content

Table 5 Comparison of the prediction accuracies (%) of PSP predictors.

From: SCMPSP: Prediction and characterization of photosynthetic proteins based on a scoring card method

Classifier PSGO-TRN PSGO-TST ORI-TRN ORI-TST ORIRW-TRN ORIRW-TST Mean
SCMPSP 83.82 71.54 77.78 62.60 81.8 64.38 66.17
SVM-AAC 85.45 78.85 71.36 50.61 71.20 57.30 62.25
SVM-DPC 83.33 72.31 68.94 69.11 67.30 61.37 67.60
SVM-AAindex 79.19 75.38 71.40 71.03 71.36 71.14 72.52
J48-AAC 68.50 73.84 64.24 63.41 68.21 49.79 62.35
J48-DPC 63.20 61.92 55.25 51.22 55.70 59.44 57.53
J48-AAindex 65.03 70.38 62.50 62.02 61.46 68.09 66.83
Bayers-AAC 67.92 69.20 64.65 63.00 65.00 65.02 65.74
Bayers-DPC 65.41 67.31 58.28 57.32 58.80 60.73 61.79
Bayes-AAindex 66.09 64.62 62.70 60.30 62.73 57.11 60.68
Mean 72.79 70.54 65.71 61.06 66.37 61.44