Table 5 Comparison of the prediction accuracies (%) of PSP predictors.
From: SCMPSP: Prediction and characterization of photosynthetic proteins based on a scoring card method
Classifier | PSGO-TRN | PSGO-TST | ORI-TRN | ORI-TST | ORIRW-TRN | ORIRW-TST | Mean |
|---|---|---|---|---|---|---|---|
SCMPSP | 83.82 | 71.54 | 77.78 | 62.60 | 81.8 | 64.38 | 66.17 |
SVM-AAC | 85.45 | 78.85 | 71.36 | 50.61 | 71.20 | 57.30 | 62.25 |
SVM-DPC | 83.33 | 72.31 | 68.94 | 69.11 | 67.30 | 61.37 | 67.60 |
SVM-AAindex | 79.19 | 75.38 | 71.40 | 71.03 | 71.36 | 71.14 | 72.52 |
J48-AAC | 68.50 | 73.84 | 64.24 | 63.41 | 68.21 | 49.79 | 62.35 |
J48-DPC | 63.20 | 61.92 | 55.25 | 51.22 | 55.70 | 59.44 | 57.53 |
J48-AAindex | 65.03 | 70.38 | 62.50 | 62.02 | 61.46 | 68.09 | 66.83 |
Bayers-AAC | 67.92 | 69.20 | 64.65 | 63.00 | 65.00 | 65.02 | 65.74 |
Bayers-DPC | 65.41 | 67.31 | 58.28 | 57.32 | 58.80 | 60.73 | 61.79 |
Bayes-AAindex | 66.09 | 64.62 | 62.70 | 60.30 | 62.73 | 57.11 | 60.68 |
Mean | 72.79 | 70.54 | 65.71 | 61.06 | 66.37 | 61.44 | Â |