Table 7 The amino acids scores derived from SCMPSP and physicochemical properties selected by SCM-PCPs.
From: SCMPSP: Prediction and characterization of photosynthetic proteins based on a scoring card method
Amino acid | PS protein Score (Rank) | 1BLAS910101 Score (Rank) | 2WOLR810101 Score (Rank) | 3PUNT030101 Score (Rank) |
|---|---|---|---|---|
A-Ala | 522.9 (1) | 0.62 (10) | 1.95 (5) | -0.17 (15) |
F-Phe | 516.7 (2) | 1.00 (1) | -0.76 (6) | -0.41 (20) |
Y-Tyr | 498.9 (3) | 0.88 (4) | -6.11 (13) | -0.09 (13) |
I-Ile | 495.8 (4) | 0.94 (2) | 2.15 (3) | -0.28 (18) |
L-Leu | 484.9 (5) | 0.94 (3) | 2.28 (2) | -0.28 (19) |
G-Gly | 482.7 (6) | 0.50 (11) | 2.39 (1) | 0.01 (10) |
V-Val | 448.6 (7) | 0.83 (6) | 1.99 (4) | -0.17 (16) |
M-Met | 447.7 (8) | 0.74 (7) | -1.48 (8) | -0.26 (17) |
P-Pro | 429.3 (9) | 0.71 (8) | -3.68 (9) | 0.13 (7) |
W-Trp | 417.4 (10) | 0.88 (5) | -5.88 (12) | -0.15 (14) |
T-Thr | 413.6 (11) | 0.45 (12) | -4.88 (10) | 0.02 (9) |
S-Ser | 383.6 (12) | 0.36 (13) | -5.06 (11) | 0.05 (8) |
N-Asn | 376.1 (13) | 0.24 (16) | -9.68 (16) | 0.18 (5) |
H-His | 373.3 (14) | 0.17 (17) | -10.27 (18) | -0.02 (11) |
C-Cys | 371.1 (15) | 0.68 (9) | -1.24 (7) | -0.06 (12) |
K-Lys | 370.7 (16) | 0.28 (14) | -9.52 (15) | 0.32 (3) |
D-Asp | 358.8 (17) | 0.038 (19) | -10.95 (19) | 0.37 (1) |
R-Arg | 356.7 (18) | 0.00 (20) | -19.92 (20) | 0.37 (2) |
E-Glu | 350.9 (19) | 0.04 (18) | -10.20 (17) | 0.15 (6) |
Q-Gln | 313.1 (20) | 0.25 (15) | -9.38 (14) | 0.26 (4) |
R | 1.000 | 0.7955 | 0.76 | -0.79 |