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Table 8 The SCMPSP scores and Rate constants by Davies et al. [48]

From: SCMPSP: Prediction and characterization of photosynthetic proteins based on a scoring card method

Amino acid

PS protein

Score (Rank)

Rate constants by Davies et al. [48]

A-Ala

522.9 (1)

7.7 × 107

F-Phe

516.7 (2)

6.5 × 109

Y-Tyr

498.9 (3)

1.3 × 1010

I-Ile

495.8 (4)

1.8 × 109

L-Leu

484.9 (5)

1.7 × 109

G-Gly

482.7 (6)

1.7 × 107

V-Val

448.6 (7)

7.6 × 108

M-Met

447.7 (8)

8.3 × 109

P-Pro

429.3 (9)

4.8 × 108

W-Trp

417.4 (10)

1.3 × 1010

T-Thr

482.7 (11)

5.1 × 108

S-Ser

448.6 (12)

3.2 × 108

N-Asn

447.7 (13)

4.9 × 107

H-His

429.3 (14)

1.3 × 1010

C-Cys

417.4 (15)

3.4 × 1010

K-Lys

370.7 (16)

3.4 × 108

D-Asp

358.8 (17)

7.5 × 107

R-Arg

356.7 (18)

3.5 × 109

E-Glu

350.9 (19)

2.3 × 108

Q-Gln

313.1 (20)

5.4 × 108

R1a

R2b

1.00

1.00

0.31

0.50

  1. a. all amino acid residues
  2. b. excluding the amino acids lacking the side chain effect