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Table 11 Most frequent GRO concepts and their ancestor concepts that correspond to Genia concepts.

From: Extending the evaluation of Genia Event task toward knowledge base construction and comparison to Gene Regulation Ontology task

Genia concept (count)

GRO concepts and their ancestors corresponding to the Genia concept (count)

Protein (2887)

Protein (1521)

 

Gene (482)

 

TranscriptionFactor < TranscriptionRegulator < Protein (294)

 

Enzyme < Protein (264)

 

ProteinSubunit < Protein (143)

Regulation (289)

RegulatoryProcess (221)

 

PositiveRegulationOfGeneExpression < RegulationOfGeneExpression < RegulatoryProcess (22)

 

NegativeRegulationOfTranscription < RegulationOfTranscription < RegulatoryProcess (18)

Gene_expression (237)

GeneExpression (237)

Positive_regulation (229)

PositiveRegulation (229)

Negative_regulation (145)

NegativeRegulation (145)

Binding (126)

BindingToProtein (126)

Localization (112)

Localization (62)

 

Transport < Localization (36)

 

ProteinTargeting < ProteinTransport < Localization (12)

Transcription (105)

Transcription (83)

 

TranscriptionOfGene < Transcription (22)