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Table 16 Changes of errors for frequent subconcepts of the GRO concepts that have equivalent correspondent Genia concepts, by the data conversion.

From: Extending the evaluation of Genia Event task toward knowledge base construction and comparison to Gene Regulation Ontology task

Concept

No. of instances

Before conversion

After conversion

  

FP

FN

FP

FN

BindingOfProteinToDNA

55

42

45

34

46

PositiveRegulationOfGeneExpression

33

11

25

6

28

Heterodimerization

32

6

25

4

25

BindingOfTranscriptionFactorToDNA

25

0

25

0

25

PositiveRegulationOfTranscription

24

0

4

0

4

  1. FP stands for false positives and FN stands for false negatives.
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BMC Bioinformatics

ISSN: 1471-2105

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