Skip to main content

Table 4 Results of annotation-oriented evaluation on Gene-expression and Localization. Acronyms: GS=gold standard, P=positives, TP=true positives, R=recall, P=precision, F=f-score.

From: Extending the evaluation of Genia Event task toward knowledge base construction and comparison to Gene Regulation Ontology task

 

Gene_expression

Localization

 

P

TP

R / P / F

P

TP

R / P / F

GS

619

619

 

99

99

-

EVEX

600

504

81.42 / 84.00 / 82.69

56

47

47.47 / 83.93 / 60.65

TEES-2.1

600

504

81.42 / 84.00 / 82.69

59

50

50.51 / 84.75 / 63.29

BioSEM

526

457

73.83 / 86.88 / 79.83

47

42

42.42 / 89.36 / 57.53

NCBI

641

495

79.97 / 77.22 / 78.57

47

39

39.39 / 82.98 / 53.42

DlutNLP

580

480

77.54 / 82.76 / 80.07

39

35

35.35 / 89.74 / 50.72

HDS4NLP

556

501

80.94 / 90.11 / 85.28

66

50

50.51 / 75.76 / 60.61

NICTANLM

761

506

81.74 / 66.49 / 73.33

52

31

31.31 / 59.62 / 41.06

USheff

450

386

62.36 / 85.78 / 72.22

27

23

23.23 / 85.19 / 36.51

UZH

497

406

65.59 / 81.69 / 72.76

39

34

34.34 / 87.18 / 49.28

HCMUS

790

488

78.84 / 61.77 / 69.27

61

32

32.32 / 52.46 / 40.00