Table 8 Results of KB evaluation for Q5 (Find the protein pairs of which one regulates the other) and Q6 (Find the protein pairs of which one regulates the other, transitive).
| Â | Q5 (Regulation) | Q6 (transitive Regulation) | ||||
|---|---|---|---|---|---|---|
| Â | P | TP | R / P / F | P | TP | R / P / F |
GS | 108 | 108 | - | 360 | 360 | - |
EVEX | 61 | 18 | 16.67 / 29.51 / 21.30 | 197 | 126 | 35.00 / 63.96 / 45.24 |
TEES-2.1 | 65 | 18 | 16.67 / 27.69 / 20.81 | 218 | 133 | 36.94 / 61.01 / 46.02 |
BioSEM | 45 | 14 | 12.96 / 31.11 / 18.30 | 155 | 90 | 25.00 / 58.06 / 34.95 |
NCBI | 34 | 8 | 07.41 / 23.53 / 11.27 | 103 | 69 | 19.17 / 66.99 / 29.81 |
DlutNLP | 69 | 20 | 18.52 / 28.99 / 22.60 | 174 | 106 | 29.44 / 60.92 / 39.70 |
HDS4NLP | 31 | 13 | 12.04 / 41.94 / 18.71 | 31 | 17 | 04.72 / 54.84 / 08.70 |
NICTANLM | 31 | 5 | 04.63 / 16.13 / 07.19 | 112 | 64 | 17.78 / 57.14 / 27.12 |
USheff | 18 | 5 | 04.63 / 27.78 / 07.94 | 60 | 35 | 09.72 / 58.33 / 16.67 |
UZH | 6 | 0 | 00.00 / 00.00 / 00.00 | 21 | 8 | 02.22 / 38.10 / 04.20 |
HCMUS | 94 | 9 | 08.33 / 09.57 / 08.91 | 156 | 33 | 09.17 / 21.15 / 12.79 |