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Table 1 Classes and types of events with their arguments (P stands for Protein, E for Event).

From: Extracting biomedical events from pairs of text entities

Class

Type

Principal arg

Optional arg

 

Gene expression

theme (P)

 

S

Transcription

theme (P)

 

V

Protein catabolism

theme (P)

 

T

Phosphorylation

theme (P)

 

Localization

theme (P)

  

B

   

I

Binding

theme (P)

theme_2 (P)

N

   

R

Regulation

theme (P/E)

cause (P/E)

E

Positive regulation

theme (P/E)

cause (P/E)

G

Negative regulation

theme (P/E)

cause (P/E)