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Table 11 The details of predicted complexes of SLPC on original PPI networks with different integrating thresholds.

From: Protein complex detection in PPI networks based on data integration and supervised learning method

int_

thred

 

DIP

 

Krogan

 

Gavin

 

#gl_sz

#cluster

#size

#matched

#gl_sz

#cluster

#size

#matched

#gl_sz

#cluster

#size

#matched

Origin

7.18

844

9.49

543

6.95

710

14.97

419

6.27

337

9.01

273

0

7.18

981

9.14

606

6.95

787

12.30

486

6.27

351

8.99

289

-0.1

7.18

1033

9.92

616

6.95

816

12.71

497

6.27

360

8.98

299

-0.2

7.18

1110

8.66

652

6.95

853

11.42

516

6.27

369

8.85

303

-0.3

7.18

1195

8.5

717

6.95

891

10.28

549

6.27

380

8.81

308

-0.4

7.18

1271

8.39

736

6.95

968

10.45

578

6.27

396

8.86

319

-0.5

7.18

1396

8.26

797

6.95

1040

10.03

595

6.27

397

8.94

318

-0.6

7.18

1580

8.42

889

6.95

1149

9.55

653

6.27

426

8.97

337

-0.7

7.18

1713

8.47

918

6.95

1243

9.26

663

6.27

446

9.07

347

-0.8

7.18

1928

8.72

1006

6.95

1402

9.24

718

6.27

475

8.89

367

-0.9

7.18

2147

8.77

1084

6.95

1555

9.10

816

6.27

521

9.01

395

-1.0

7.18

2171

9.12

1043

6.95

1612

8.83

834

6.27

540

8.88

393

-1.1

7.18

2139

9.40

995

6.95

1618

9.08

825

6.27

555

8.81

404

-1.2

7.18

2171

9.46

1016

6.95

1636

9.26

830

6.27

555

8.93

402

  1. #gl_size denotes the average size of the gold standard protein complexes on original PPI networks; #size denotes the average size of predicted complexes. #cluster denotes the number of predicted complexes on extended PPI networks; #matched denotes the matching number between the predicted complexes and the gold standard protein complexes;