Table 2 Properties of denoising PPI networks with different denoising thresholds.
From: Protein complex detection in PPI networks based on data integration and supervised learning method
den_thred | DIP | Krogan | Gavin | |||
|---|---|---|---|---|---|---|
| Â | #Pro. | #Int. | #Pro. | #Int . | #Pro. | #Int. |
0.5 | 3669 | 11617 | 2400 | 9507 | 1318 | 5971 |
0.6 | 3536 | 11316 | 2331 | 9367 | 1315 | 5963 |
0.7 | 3536 | 11316 | 2331 | 9367 | 1315 | 5963 |
0.8 | 3490 | 11190 | 2309 | 9313 | 1312 | 5958 |
0.9 | 3450 | 11084 | 2273 | 9223 | 1304 | 5942 |
1.0 | 3402 | 10933 | 2235 | 9143 | 1301 | 5928 |
1.1 | 3205 | 9486 | 2103 | 7736 | 1267 | 5492 |
1.2 | 3164 | 9381 | 2078 | 7676 | 1261 | 5486 |
1.3 | 3095 | 9219 | 2043 | 7572 | 1255 | 5469 |
1.4 | 3011 | 9019 | 1998 | 7451 | 1252 | 5449 |