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Table 1 Comparative results of varies algorithms on two yeast PPI networks

From: Dynamic identifying protein functional modules based on adaptive density modularity in protein-protein interaction networks

Dataset

Method

clusters

matched

Sn

PPV

Acc

Gavin

ClusterONE

196

82

0.519

0.479

0.498

 

MCL

253

79

0.508

0.497

0.502

 

MCODE

135

65

0.426

0.464

0.444

 

ADM

227

94

0.508

0.660

0.579

Krogan_extended

ClusterONE

530

90

0.443

0.402

0.422

 

MCL

483

68

0.411

0.408

0.409

 

MCODE

64

23

0.199

0.369

0.271

 

ADM

442

107

0.534

0.670

0.598

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BMC Bioinformatics

ISSN: 1471-2105

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