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Table 2 The comparison of varies algorithms on GO semantic similarity

From: Dynamic identifying protein functional modules based on adaptive density modularity in protein-protein interaction networks

Dataset

Method

Biological

Process

Cellular Component

Molecular Function

Gavin

ClusterONE

0.913

0.769

0.638

 

MCL

0.668

0.591

0.494

 

ADM

0.748

0.878

0.695

Krogan_extended

ClusterONE

0.667

0.508

0.505

 

MCL

0.493

0.349

0.397

 

ADM

0.586

0.765

0.555

MIPS complexes

 

0.995

0.921

0.897