Figure 2
From: Detrimental effects of duplicate reads and low complexity regions on RNA- and ChIP-seq data
Differential expression detection. Number of differentially expressed genes detected after removing reads overlapping low complexity (LC) regions. Conditions for differential expression analysis: "all LC overlaps kept/removed" - reads touching/overlapping LC regions are either kept or removed, respectively; "25%/50%/75% LC overlaps removed" - reads overlapping LC regions at least 25%/50%/75%, respectively, are removed before differential expression analysis.