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Table 1 General statistics of the RNA-seq datasets analyzed in the current study

From: Computational identification of genetic subnetwork modules associated with maize defense response to Fusarium verticillioides

  

3dpi

Wild type 6dpi

9dpi 3dpi

Mutant 6dpi

9dpi

 

Type of run

  

single

  
 

Read length

  

100 (bp)

  

Fusarium

Mean number of reads aligned

82504

200827

235702 24711

63462

138406.3

verticillioides

median depth of coverage

5.8

14.2

16.6 1.8

4.5

9.8

 

Mean number of reads aligned

4394510

4183565

3377730 3798777

3589860

3577877

Maize

median depth of coverage

32.1

30.6

24.7 27.8

26.2

26.2