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Table 3 mRNA expression of key gene mutations in the Presentation sample

From: Enhancing cancer clonality analysis with integrative genomics

Gene

DP

AF

Transcript

FPKM

MYC

192

100

ENST00000377970

42

MYC

192

100

ENST00000524013

58

SETD2

25

50

ENST00000409792

9.5

SETD2

25

50

ENST00000431180

2.2

TET2

6

50

ENST00000380013

2.0

TET2

6

50

ENST00000265149

1.2

  1. A tabular version of the clonal dynamics as shown in Figure 3B, lists changes in depth, allelic frequency and FPKM in the Presentation sample. Abbreviations: DP (Depth) and Allelic Frequency (AF).
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BMC Bioinformatics

ISSN: 1471-2105

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