From: Reconstruction of ancestral gene orders using intermediate genomes
Dataset | 20 genomes, 500 genes | 12 genomes, 5000 genes | ||||||
---|---|---|---|---|---|---|---|---|
Diameter | D= 1n | D= 2n | D= 3n | D= 4n | D= 1n | D= 2n | D= 3n | D= 4n |
SCJ | 3 s | 3 s | 4 s | 4 s | 7 s | 9s | 11 s | 11 s |
PATHGROUPS | 18 s | 40 s | 57 s | 1 m18 s | 22 m16 s | 1 h21 m42 s | 1 h16 m34 s | 31 m13 s |
GASTS | 22 s | 1 m6 s | 2 m46 s | 4 m41 s | 1 h14 m6 s | 12 h27 m13 s | 19 h8 m55 s | 22 h2 m32 s |
ProCARs | 14 m9 s | 30 m10 s | 36 m28 s | 1 h9 m5 s | - | - | - | - |
IG-Pure | 2 s | 3 s | 3 s | 3 s | 1 m38 s | 2 m23 s | 2 m44 s | 1 m53 s |
IG-SCJ | 2 s | 3 s | 4 s | 4 s | 1 m4 s | 1 m41 s | 2 m8 s | 1 m26 s |
IG-ProCARs | 3 s | 3 s | 4 s | 4 s | - | - | - | - |