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Table 3 Performance measurement of different system settings on the GRN training data.

From: Application of the EVEX resource to event extraction and network construction: Shared Task entry and result analysis

Method

Dataset

SER

F

Rel. P

Rel. R

Rel. F

Rel. SER

TC

All EVEX data

1.56

8.86

39.29%

41.98%

40.59%

1.23

TC, ETF

All EVEX data

1.15

11.53

59.74%

35.11%

44.23%

0.89

TC, ETF

B. subtilis PMIDs

0.954

20.81

71.43%

22.90%

34.68%

0.86

TC, ETF

GRN PMIDs

0.939

17.39

80.00%

18.32%

29.81%

0.86

  1. The SER score is the main evaluation criterion of the GRN challenge. The relaxed precision, recall, F and SER scores are produced by scoring the predictions regardless of the specific event types. TC refers to rule-based EVEX-GRN type conversion, ETF to rule-based entity type filtering. The ML-based methods are not shown because they are trained on this dataset.