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Table 5 Comparison of running time and memory usage for SpliceJumper, TopHat2 and MapSplice2 on simulated Test1 dataset.

From: SpliceJumper: a classification-based approach for calling splicing junctions from RNA-seq data

Tools Running time Memory
SpliceJumper 711 minutes and 28 seconds 3.14G
TopHat2 679 minutes and 18 seconds 6.53G
MapSplice2 548 minutes and 5 seconds 4.61G