Table 2 Alignment of sequence datasets.
Data Set | Reference Strain | Number of Reads | Aligned (%) | Unaligned (%) | Ambiguous (%) | Perfect Reads (%) | Error Rate |
|---|---|---|---|---|---|---|---|
S1 | DroMir2.2 | 65603904 | 43580948 (66.4) | 18010469 (27.5) | 4012487 ( 6.1) | 33234182 (50.7) | 0.71 |
S2 | O157:H7 | 20461442 | 18191534 (88.9) | 1045418 ( 5.1) | 1224490( 6.0) | 13294580 (65.0) | 0.72 |
S3 | 3D7 | 112418270 | 88192289(78.5) | 19516044 (17.4) | 4709936 ( 4.2) | 74845636 (66.6) | 0.43 |
S4 | CS | 54996906 | 46950786 (85.4) | 3957391 ( 7.2) | 4088729 ( 7.4) | 44437437 (80.8) | 0.24 |
S5 | 3D7 | 49738806 | 41836006 (84.1) | 5818785 (11.7) | 2084015 ( 4.2) | 40472551 (81.4) | 0.18 |
S6 | S288c | 57886340 | 46179933 (79.8) | 2213383 ( 3.8) | 9493023 (16.4) | 51612399 (89.2) | 0.13 |