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Table 1 Description of features.

From: Positive-unlabeled learning for the prediction of conformational B-cell epitopes

Features

Collected from

Feature No.

Physico-chemical

AAIndex (80% similarity)

1-205

PSSM

Psi-BLAST

206-225

PSSM residue

PSSM

226

PI

PSAIA

227

Secondary structure

DSSP

228-235

ASA

NACCESS

236

RSA

NACCESS

237

B-factor

PDB files

238

B-factor CA

PDB files

239

  1. 'Feature No.' describes the number of dimensions for each feature type.
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BMC Bioinformatics

ISSN: 1471-2105

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