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Figure 3 | BMC Bioinformatics

Figure 3

From: PCTFPeval: a web tool for benchmarking newly developed algorithms for predicting cooperative transcription factor pairs in yeast

Figure 3

The output of our tool. Here we input the sample data (a list of 40 TF pairs) as a list of the predicted cooperative TF pairs (PCTFPs) from a user's algorithm and select 10 existing algorithms, eight performance indices, and the comprehensive ranking score as the overall performance score. (a) The comprehensive performance comparison results are shown as a bar chart and a table. It can be seen that the overall performance of the user's algorithm ranks three among all the 11 algorithms being compared. (b) When clicking the hyperlink of "Index5", users will get the performance comparison results (shown as both a bar chart and a table) using only the index 5. It can be seen that the user's algorithm is the best performing algorithm in the index 5. (c) When clicking the hyperlink of "Details of the score of Index5 for each compared algorithm", users will get a text file containing the original scores (calculated using the index 5) of all PCTFPs of each algorithm being compared.

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