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Table 4 Comparison of SVM prediction performance to known or predicted motifs using test set.

From: Prediction of neddylation sites from protein sequences and sequence-derived properties

Predictor Acc Sp Sn MCC
AAIV[RQ]IMKS1 0.96 1.00 0.09 0.30
IVRIMKS2 0.96 1.00 0.09 0.30
[IL][VIT][RQ][IS][MLV]K[MAS][RHE]3 0.95 1.00 0.09 0.20
SVM 0.90 0.91 0.64 0.35
  1. 1This motif was derived using MEME normal mode. 2This motif was derived using MEME discriminative mode. For prediction of both motifs, same training sites with SVM training were used. 3 This motif was reviewed in [10].