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Table 4 Performance comparison of the algorithms for predicting modules of size ≤ 6 on S. cerevisiae-2 PIN; μ = 0.5

From: The relative vertex clustering value - a new criterion for the fast discovery of functional modules in protein interaction networks

Algorithms

Number of modules

Percentage of significant modules

Mean(-log P-value)

Mean(F-Measure)

FAC-PIN

44

86.4%

6.16

0.41

HC-PIN (λ = 1)

33

59%

5.39

0.27

CNM

26

35.7%

1.81

0.08

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BMC Bioinformatics

ISSN: 1471-2105

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