From: Improving multiple sequence alignment by using better guide trees
 |  | ClustalW | MSAProbs | Probalign | ProbCons | T-Coffee | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
 |  | Adaptive | Original | Adaptive | Original | Adaptive | Original | Adaptive | Original | Adaptive | Original |
SP | 0%-60% | 52.472 | 51.957 | 60.280 | 60.245 | 59.666 | 59.532 | 59.826 | 59.690 | 59.377 | 59.158 |
 | 0%-30% | 44.504 | 43.907 | 52.081 | 51.996 | 51.251 | 51.161 | 51.601 | 51.459 | 51.266 | 50.799 |
 | 30%-60% | 81.954 | 81.739 | 90.616 | 90.766 | 90.802 | 90.507 | 90.258 | 90.146 | 89.388 | 90.087 |
TC | 0%-60% | 31.927 | 31.495 | 39.946 | 40.044 | 38.941 | 38.626 | 39.437 | 39.166 | 39.291 | 39.597 |
 | 0%-30% | 22.398 | 22.020 | 29.132 | 29.043 | 27.894 | 27.702 | 28.559 | 28.198 | 28.518 | 28.599 |
 | 30%-60% | 67.183 | 66.551 | 79.954 | 80.748 | 79.816 | 79.044 | 79.687 | 79.747 | 79.151 | 80.291 |